HL_6V3A_083

3D structure

PDB id

6V3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GCAGCC(7MG)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 7MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6V3A_083 not in the Motif Atlas

Homologous match to HL_5J7L_013

Geometric discrepancy: 0.3226

The information below is about HL_5J7L_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6V3A|1|sN1|G|518
6V3A|1|sN1|C|519
6V3A|1|sN1|A|520
6V3A|1|sN1|G|521
6V3A|1|sN1|C|522
6V3A|1|sN1|C|523
6V3A|1|sN1|7MG|524
6V3A|1|sN1|C|525

Current chains

Chain sN1

16s Ribosomal RNA

Nearby chains

Chain l

30S ribosomal protein S12