HL_6V3A_104
3D structure
- PDB id
- 6V3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- ACUCAUAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6V3A_104 not in the Motif Atlas
- Homologous match to HL_4TUE_034
- Geometric discrepancy: 0.2112
- The information below is about HL_4TUE_034
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
6V3A|1|v|A|32
6V3A|1|v|C|33
6V3A|1|v|U|34
6V3A|1|v|C|35
6V3A|1|v|A|36
6V3A|1|v|U|37
6V3A|1|v|A|38
6V3A|1|v|A|39
6V3A|1|v|U|40
Current chains
- Chain v
- tRNA-met
Nearby chains
- Chain i
- 30S ribosomal protein S9
- Chain sN1
- Small subunit ribosomal RNA; SSU rRNA
- Chain w
- mRNA
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