3D structure

PDB id
6V3E (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 30S subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
CUACGG
Length
6 nucleotides
Bulged bases
6V3E|1|sN1|A|184
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6V3E_004 not in the Motif Atlas
Geometric match to HL_6CK5_001
Geometric discrepancy: 0.1798
The information below is about HL_6CK5_001
Detailed Annotation
UNCG
Broad Annotation
No text annotation
Motif group
HL_34617.5
Basepair signature
cWW-tSW-F
Number of instances in this motif group
57

Unit IDs

6V3E|1|sN1|C|182
6V3E|1|sN1|U|183
6V3E|1|sN1|A|184
6V3E|1|sN1|C|185
6V3E|1|sN1|G|186
6V3E|1|sN1|G|187

Current chains

Chain sN1
16s Ribosomal RNA

Nearby chains

Chain t
30S ribosomal protein S20

Coloring options:


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