3D structure

PDB id
6V3E (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 30S subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
GCUUAAC
Length
7 nucleotides
Bulged bases
6V3E|1|sN1|U|616
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6V3E_014 not in the Motif Atlas
Homologous match to HL_4LFB_014
Geometric discrepancy: 0.2549
The information below is about HL_4LFB_014
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_10453.3
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
9

Unit IDs

6V3E|1|sN1|G|614
6V3E|1|sN1|C|615
6V3E|1|sN1|U|616
6V3E|1|sN1|U|617
6V3E|1|sN1|A|618
6V3E|1|sN1|A|619
6V3E|1|sN1|C|620

Current chains

Chain sN1
16s Ribosomal RNA

Nearby chains

Chain d
30S ribosomal protein S4
Chain p
30S ribosomal protein S16

Coloring options:


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