HL_6VLZ_002
3D structure
- PDB id
- 6VLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.97 Å
Loop
- Sequence
- AGGCGAU
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6VLZ_002 not in the Motif Atlas
- Geometric match to HL_4WF9_008
- Geometric discrepancy: 0.2563
- The information below is about HL_4WF9_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_76371.2
- Basepair signature
- cWW-tSH-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
6VLZ|1|A|A|1746
6VLZ|1|A|G|1747
6VLZ|1|A|G|1748
6VLZ|1|A|C|1749
6VLZ|1|A|G|1750
6VLZ|1|A|A|1751
6VLZ|1|A|U|1752
Current chains
- Chain A
- 16s rRNA
Nearby chains
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain A7
- E-tRNA
- Chain H
- 39S ribosomal protein L9, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain X
- 39S ribosomal protein L28, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
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