HL_6VLZ_006
3D structure
- PDB id
- 6VLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.97 Å
Loop
- Sequence
- GAGAGC
- Length
- 6 nucleotides
- Bulged bases
- 6VLZ|1|A|G|1886
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6VLZ_006 not in the Motif Atlas
- Geometric match to HL_5J7L_143
- Geometric discrepancy: 0.2235
- The information below is about HL_5J7L_143
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
6VLZ|1|A|G|1884
6VLZ|1|A|A|1885
6VLZ|1|A|G|1886
6VLZ|1|A|A|1887
6VLZ|1|A|G|1888
6VLZ|1|A|C|1889
Current chains
- Chain A
- 16s rRNA
Nearby chains
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain g
- 39S ribosomal protein L49, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
- Chain q
- Growth arrest and DNA damage-inducible proteins-interacting protein 1
Coloring options: