3D structure

PDB id
6VLZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.97 Å

Loop

Sequence
GCAGAACCCAACC
Length
13 nucleotides
Bulged bases
6VLZ|1|A|G|2831, 6VLZ|1|A|A|2832, 6VLZ|1|A|C|2839
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6VLZ|1|A|G|2828
6VLZ|1|A|C|2829
6VLZ|1|A|A|2830
6VLZ|1|A|G|2831
6VLZ|1|A|A|2832
6VLZ|1|A|A|2833
6VLZ|1|A|C|2834
6VLZ|1|A|C|2835
6VLZ|1|A|C|2836
6VLZ|1|A|A|2837
6VLZ|1|A|A|2838
6VLZ|1|A|C|2839
6VLZ|1|A|C|2840

Current chains

Chain A
16s rRNA

Nearby chains

Chain 6
39S ribosomal protein L38, mitochondrial
Chain N
39S ribosomal protein L16, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain Z
39S ribosomal protein L30, mitochondrial
Chain f
39S ribosomal protein L48, mitochondrial

Coloring options:

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