HL_6VLZ_039
3D structure
- PDB id
- 6VLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.97 Å
Loop
- Sequence
- CAAGAACAG
- Length
- 9 nucleotides
- Bulged bases
- 6VLZ|1|A|A|3217
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6VLZ_039 not in the Motif Atlas
- Geometric match to HL_7A0S_067
- Geometric discrepancy: 0.1529
- The information below is about HL_7A0S_067
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_37889.1
- Basepair signature
- cWW-cSW-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
6VLZ|1|A|C|3216
6VLZ|1|A|A|3217
6VLZ|1|A|A|3218
6VLZ|1|A|G|3219
6VLZ|1|A|A|3220
6VLZ|1|A|A|3221
6VLZ|1|A|C|3222
6VLZ|1|A|A|3223
6VLZ|1|A|G|3224
Current chains
- Chain A
- 16s rRNA
Nearby chains
- Chain 0
- 39S ribosomal protein L32, mitochondrial
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain O
- 39S ribosomal protein L17, mitochondrial
- Chain Q
- 39S ribosomal protein L19, mitochondrial
Coloring options: