HL_6VLZ_054
3D structure
- PDB id
- 6VLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.97 Å
Loop
- Sequence
- UGAUGAA
- Length
- 7 nucleotides
- Bulged bases
- 6VLZ|1|AA|A|1283, 6VLZ|1|AA|U|1284, 6VLZ|1|AA|G|1285
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6VLZ_054 not in the Motif Atlas
- Geometric match to HL_1P6V_001
- Geometric discrepancy: 0.2713
- The information below is about HL_1P6V_001
- Detailed Annotation
- UNCG variation
- Broad Annotation
- UNCG variation
- Motif group
- HL_53890.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
6VLZ|1|AA|U|1281
6VLZ|1|AA|G|1282
6VLZ|1|AA|A|1283
6VLZ|1|AA|U|1284
6VLZ|1|AA|G|1285
6VLZ|1|AA|A|1286
6VLZ|1|AA|A|1287
Current chains
- Chain AA
- 12s rRNA
Nearby chains
- Chain AB
- 28S ribosomal protein S2, mitochondrial
- Chain AD
- 28S ribosomal protein S5, mitochondrial
- Chain AE
- 28S ribosomal protein S6, mitochondrial
- Chain AS
- 28S ribosomal protein S23, mitochondrial
Coloring options: