HL_6VMI_005

3D structure

PDB id

6VMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

CCUUCUGCAUAAUG

Length

14 nucleotides

Bulged bases

6VMI|1|A|A|1855

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VMI|1|A|C|1845
6VMI|1|A|C|1846
6VMI|1|A|U|1847
6VMI|1|A|U|1848
6VMI|1|A|C|1849
6VMI|1|A|U|1850
6VMI|1|A|G|1851
6VMI|1|A|C|1852
6VMI|1|A|A|1853
6VMI|1|A|U|1854
6VMI|1|A|A|1855
6VMI|1|A|A|1856
6VMI|1|A|U|1857
6VMI|1|A|G|1858

Current chains

Chain A

16s rRNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain M

39S ribosomal protein L15, mitochondrial

Chain R

39S ribosomal protein L20, mitochondrial

Chain S

39S ribosomal protein L21, mitochondrial