HL_6VMI_015
3D structure
- PDB id
- 6VMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- CGUUCAAG
- Length
- 8 nucleotides
- Bulged bases
- 6VMI|1|A|U|2204
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6VMI_015 not in the Motif Atlas
- Geometric match to HL_4WF9_011
- Geometric discrepancy: 0.1624
- The information below is about HL_4WF9_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.8
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 23
Unit IDs
6VMI|1|A|C|2202
6VMI|1|A|G|2203
6VMI|1|A|U|2204
6VMI|1|A|U|2205
6VMI|1|A|C|2206
6VMI|1|A|A|2207
6VMI|1|A|A|2208
6VMI|1|A|G|2209
Current chains
- Chain A
- 16s rRNA
Nearby chains
- Chain 4
- 39S ribosomal protein L36, mitochondrial
- Chain J
- 39S ribosomal protein L11, mitochondrial
- Chain l
- 39S ribosomal protein L54, mitochondrial
- Chain v
- Elongation factor G, mitochondrial
Coloring options: