HL_6VMI_020
3D structure
- PDB id
- 6VMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- CAACACAG
- Length
- 8 nucleotides
- Bulged bases
- 6VMI|1|A|A|2430, 6VMI|1|A|A|2432, 6VMI|1|A|A|2434
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6VMI_020 not in the Motif Atlas
- Homologous match to HL_4WF9_038
- Geometric discrepancy: 0.2959
- The information below is about HL_4WF9_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_28592.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
6VMI|1|A|C|2428
6VMI|1|A|A|2429
6VMI|1|A|A|2430
6VMI|1|A|C|2431
6VMI|1|A|A|2432
6VMI|1|A|C|2433
6VMI|1|A|A|2434
6VMI|1|A|G|2435
Current chains
- Chain A
- 16s rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain 9
- 39S ribosomal protein L41, mitochondrial
- Chain T
- 39S ribosomal protein L22, mitochondrial
- Chain d
- 39S ribosomal protein L45, mitochondrial
Coloring options: