HL_6VMI_034

3D structure

PDB id

6VMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

UUGUUCA

Length

7 nucleotides

Bulged bases

6VMI|1|A|G|3040

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6VMI_034 not in the Motif Atlas

Geometric match to HL_7A0S_011

Geometric discrepancy: 0.3411

The information below is about HL_7A0S_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

6VMI|1|A|U|3038
6VMI|1|A|U|3039
6VMI|1|A|G|3040
6VMI|1|A|U|3041
6VMI|1|A|U|3042
6VMI|1|A|C|3043
6VMI|1|A|A|3044

Current chains

Chain A

16s rRNA

Nearby chains