HL_6VMI_036

3D structure

PDB id

6VMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6VMI_036 not in the Motif Atlas

Geometric match to HL_3IWN_001

Geometric discrepancy: 0.3556

The information below is about HL_3IWN_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

6VMI|1|A|C|3126
6VMI|1|A|G|3127
6VMI|1|A|A|3128
6VMI|1|A|A|3129
6VMI|1|A|A|3130
6VMI|1|A|G|3131

Current chains

Chain A

16s rRNA

Nearby chains

Chain v

Elongation factor G, mitochondrial