HL_6VMI_053
3D structure
- PDB id
- 6VMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- GAUAAACCCC
- Length
- 10 nucleotides
- Bulged bases
- 6VMI|1|AA|C|1223, 6VMI|1|AA|C|1224, 6VMI|1|AA|C|1225
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6VMI_053 not in the Motif Atlas
- Geometric match to HL_4WF9_003
- Geometric discrepancy: 0.161
- The information below is about HL_4WF9_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.8
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 23
Unit IDs
6VMI|1|AA|G|1217
6VMI|1|AA|A|1218
6VMI|1|AA|U|1219
6VMI|1|AA|A|1220
6VMI|1|AA|A|1221
6VMI|1|AA|A|1222
6VMI|1|AA|C|1223
6VMI|1|AA|C|1224
6VMI|1|AA|C|1225
6VMI|1|AA|C|1226
Current chains
- Chain AA
- 12s rRNA
Nearby chains
- Chain A6
- P-site and E-site tRNA
- Chain AG
- 28S ribosomal protein S9, mitochondrial
- Chain AH
- 28S ribosomal protein S10, mitochondrial
- Chain v
- Elongation factor G, mitochondrial
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