HL_6VMI_067

3D structure

PDB id

6VMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

(P5P)(Y5P)(Y5P)(Y5P)(P5P)(Y5P)(P5P)(Y5P)(Y5P)

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VMI|1|A6|P5P|28
6VMI|1|A6|Y5P|29
6VMI|1|A6|Y5P|30
6VMI|1|A6|Y5P|31
6VMI|1|A6|P5P|32
6VMI|1|A6|Y5P|33
6VMI|1|A6|P5P|34
6VMI|1|A6|Y5P|35
6VMI|1|A6|Y5P|36

Current chains

Chain A6

P-site and E-site tRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain AG

28S ribosomal protein S9, mitochondrial

Chain v

Elongation factor G, mitochondrial