HL_6VU3_024

3D structure

PDB id

6VU3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Escherichia coli transcription-translation complex A (TTC-A) containing mRNA with a 12 nt long spacer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

6VU3|1|D|U|842

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VU3|1|D|C|840
6VU3|1|D|C|841
6VU3|1|D|U|842
6VU3|1|D|U|843
6VU3|1|D|G|844
6VU3|1|D|A|845
6VU3|1|D|G|846

Current chains

Chain D

16S rRNA

Nearby chains

Chain C

30S ribosomal protein S18

Chain H

30S ribosomal protein S1