HL_6VU3_062
3D structure
- PDB id
- 6VU3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Escherichia coli transcription-translation complex A (TTC-A) containing mRNA with a 12 nt long spacer
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAACCCG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6VU3_062 not in the Motif Atlas
- Geometric match to HL_6DTD_001
- Geometric discrepancy: 0.2581
- The information below is about HL_6DTD_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_48417.6
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 22
Unit IDs
6VU3|1|a|C|885
6VU3|1|a|A|886
6VU3|1|a|A|887
6VU3|1|a|C|888
6VU3|1|a|C|889
6VU3|1|a|C|890
6VU3|1|a|G|891
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain X
- 30S ribosomal protein S13
Coloring options: