HL_6VYQ_109

3D structure

PDB id

6VYQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation complex A1 (TTC-A1) containing an 15 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGACCUUCGGGC

Length

12 nucleotides

Bulged bases

6VYQ|1|D|U|209

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VYQ|1|D|G|203
6VYQ|1|D|G|204
6VYQ|1|D|A|205
6VYQ|1|D|C|206
6VYQ|1|D|C|207
6VYQ|1|D|U|208
6VYQ|1|D|U|209
6VYQ|1|D|C|210
6VYQ|1|D|G|211
6VYQ|1|D|G|212
6VYQ|1|D|G|213
6VYQ|1|D|C|214

Current chains

Chain D

16S rRNA

Nearby chains