HL_6VZ2_067

3D structure

PDB id

6VZ2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation complex D1 (TTC-D1) containing mRNA with a 27 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

10 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

6VZ2|1|a|U|1173, 6VZ2|1|a|U|1174, 6VZ2|1|a|A|1175, 6VZ2|1|a|U|1176

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VZ2|1|a|C|1172
6VZ2|1|a|U|1173
6VZ2|1|a|U|1174
6VZ2|1|a|A|1175
6VZ2|1|a|U|1176
6VZ2|1|a|G|1177

Current chains

Chain a

23S rRNA

Nearby chains