3D structure

PDB id
6W6V (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of yeast RNase MRP holoenzyme
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GAUUUAAAAAUAAAUCAAC
Length
19 nucleotides
Bulged bases
6W6V|1|A|U|125, 6W6V|1|A|A|131
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6W6V|1|A|G|122
6W6V|1|A|A|123
6W6V|1|A|U|124
6W6V|1|A|U|125
6W6V|1|A|U|126
6W6V|1|A|A|127
6W6V|1|A|A|128
6W6V|1|A|A|129
6W6V|1|A|A|130
6W6V|1|A|A|131
6W6V|1|A|U|144
6W6V|1|A|A|145
6W6V|1|A|A|146
6W6V|1|A|A|147
6W6V|1|A|U|148
6W6V|1|A|C|149
6W6V|1|A|A|150
6W6V|1|A|A|151
6W6V|1|A|C|152

Current chains

Chain A
RNA component of RNase MRP NME1

Nearby chains

Chain B
Ribonucleases P/MRP protein subunit POP1
Chain D
RNases MRP/P 32.9 kDa subunit
Chain K
Ribonuclease MRP protein subunit SNM1

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0626 s