HL_6W7M_022

3D structure

PDB id

6W7M (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactive-high-Mg2+ + carbon layer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AGAGAU

Length

6 nucleotides

Bulged bases

6W7M|1|A|A|1014

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W7M_022 not in the Motif Atlas

Geometric match to HL_4WF9_011

Geometric discrepancy: 0.2914

The information below is about HL_4WF9_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

6W7M|1|A|A|1012
6W7M|1|A|G|1013
6W7M|1|A|A|1014
6W7M|1|A|G|1015
6W7M|1|A|A|1016
6W7M|1|A|U|1017

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S14

Chain S

30S ribosomal protein S19