HL_6W7M_027

3D structure

PDB id

6W7M (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactive-high-Mg2+ + carbon layer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UGAUAAA

Length

7 nucleotides

Bulged bases

6W7M|1|A|U|1168

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W7M_027 not in the Motif Atlas

Homologous match to HL_4LFB_027

Geometric discrepancy: 0.3969

The information below is about HL_4LFB_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

6W7M|1|A|U|1165
6W7M|1|A|G|1166
6W7M|1|A|A|1167
6W7M|1|A|U|1168
6W7M|1|A|A|1169
6W7M|1|A|A|1170
6W7M|1|A|A|1171

Current chains

Chain A

16S rRNA

Nearby chains

Chain B

30S ribosomal protein S2