HL_6WD7_005

3D structure

PDB id

6WD7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUGAAUCCAUAGG

Length

13 nucleotides

Bulged bases

6WD7|1|1|U|162

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WD7|1|1|C|157
6WD7|1|1|U|158
6WD7|1|1|G|159
6WD7|1|1|A|160
6WD7|1|1|A|161
6WD7|1|1|U|162
6WD7|1|1|C|163
6WD7|1|1|C|164
6WD7|1|1|A|165
6WD7|1|1|U|166
6WD7|1|1|A|167
6WD7|1|1|G|168
6WD7|1|1|G|169

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain g

50S ribosomal protein L9

Chain x

50S ribosomal protein L28