HL_6WD7_095

3D structure

PDB id

6WD7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

6WD7|1|3|C|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WD7_095 not in the Motif Atlas

Homologous match to HL_6CZR_097

Geometric discrepancy: 0.2368

The information below is about HL_6CZR_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WD7|1|3|G|1134
6WD7|1|3|U|1135
6WD7|1|3|C|1136
6WD7|1|3|C|1137
6WD7|1|3|G|1138
6WD7|1|3|G|1139
6WD7|1|3|C|1140

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain N

30S ribosomal protein S9