HL_6WDA_027

3D structure

PDB id

6WDA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

6WDA|1|1|U|1066, 6WDA|1|1|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WDA|1|1|C|1064
6WDA|1|1|U|1065
6WDA|1|1|U|1066
6WDA|1|1|A|1067
6WDA|1|1|G|1068
6WDA|1|1|A|1069
6WDA|1|1|A|1070
6WDA|1|1|G|1071
6WDA|1|1|C|1072
6WDA|1|1|A|1073
6WDA|1|1|G|1074

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 7

Transfer RNA; tRNA

Chain i

50S ribosomal protein L11

Chain m

50S ribosomal protein L16