HL_6WDE_075

3D structure

PDB id

6WDE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

6WDE|1|3|U|209, 6WDE|1|3|C|210

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WDE_075 not in the Motif Atlas

Geometric match to HL_5J7L_151

Geometric discrepancy: 0.3772

The information below is about HL_5J7L_151

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80922.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

3

Unit IDs

6WDE|1|3|C|206
6WDE|1|3|C|207
6WDE|1|3|U|208
6WDE|1|3|U|209
6WDE|1|3|C|210
6WDE|1|3|G|211
6WDE|1|3|G|212
6WDE|1|3|G|213

Current chains

Chain 3

16S ribosomal RNA

Nearby chains