HL_6WDF_104
3D structure
- PDB id
- 6WDF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- 6WDF|1|5|C|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WDF_104 not in the Motif Atlas
- Homologous match to HL_4YCP_002
- Geometric discrepancy: 0.3158
- The information below is about HL_4YCP_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6WDF|1|5|G|31
6WDF|1|5|C|32
6WDF|1|5|U|33
6WDF|1|5|C|34
6WDF|1|5|A|35
6WDF|1|5|U|36
6WDF|1|5|A|37
6WDF|1|5|A|38
6WDF|1|5|C|39
Current chains
- Chain 5
- tRNAfMet
Nearby chains
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain 4
- mRNA
- Chain N
- 30S ribosomal protein S9
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