HL_6WDK_053
3D structure
- PDB id
- 6WDK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUAAAGAGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 6WDK|1|1|A|2268, 6WDK|1|1|C|2275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WDK_053 not in the Motif Atlas
- Homologous match to HL_4WF9_050
- Geometric discrepancy: 0.1286
- The information below is about HL_4WF9_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91939.2
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
6WDK|1|1|C|2264
6WDK|1|1|U|2265
6WDK|1|1|A|2266
6WDK|1|1|A|2267
6WDK|1|1|A|2268
6WDK|1|1|G|2269
6WDK|1|1|A|2270
6WDK|1|1|G|2271
6WDK|1|1|U|2272
6WDK|1|1|A|2273
6WDK|1|1|A|2274
6WDK|1|1|C|2275
6WDK|1|1|G|2276
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain m
- 50S ribosomal protein L16
- Chain w
- 50S ribosomal protein L27
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