HL_6WDK_075

3D structure

PDB id

6WDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

6WDK|1|3|U|209, 6WDK|1|3|C|210

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WDK_075 not in the Motif Atlas

Geometric match to HL_5J7L_151

Geometric discrepancy: 0.388

The information below is about HL_5J7L_151

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80922.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

3

Unit IDs

6WDK|1|3|C|206
6WDK|1|3|C|207
6WDK|1|3|U|208
6WDK|1|3|U|209
6WDK|1|3|C|210
6WDK|1|3|G|211
6WDK|1|3|G|212
6WDK|1|3|G|213

Current chains

Chain 3

16S ribosomal RNA

Nearby chains