HL_6WDR_021

3D structure

PDB id

6WDR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subunit joining exposes nascent pre-40S rRNA for processing and quality control

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUUUUUUAAUGA

Length

12 nucleotides

Bulged bases

6WDR|1|2|U|1212

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WDR|1|2|U|1206
6WDR|1|2|U|1207
6WDR|1|2|U|1208
6WDR|1|2|U|1209
6WDR|1|2|U|1210
6WDR|1|2|U|1211
6WDR|1|2|U|1212
6WDR|1|2|A|1213
6WDR|1|2|A|1214
6WDR|1|2|U|1215
6WDR|1|2|G|1216
6WDR|1|2|A|1217

Current chains

Chain 2

20S ribosomal RNA

Nearby chains

Chain R

40S ribosomal protein S17-A

Chain b

40S ribosomal protein S27-A