HL_6WLT_053

3D structure

PDB id

6WLT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Apo V. cholerae glycine riboswitch models, 4.8 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

AUAUAUU

Length

7 nucleotides

Bulged bases

6WLT|11|A|A|101

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WLT_053 not in the Motif Atlas

Geometric match to HL_3IGI_004

Geometric discrepancy: 0.3792

The information below is about HL_3IGI_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37569.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

6WLT|11|A|A|99
6WLT|11|A|U|100
6WLT|11|A|A|101
6WLT|11|A|U|102
6WLT|11|A|A|103
6WLT|11|A|U|104
6WLT|11|A|U|105

Current chains

Chain A

RNA (231-MER)

Nearby chains