HL_6WLT_075

3D structure

PDB id

6WLT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Apo V. cholerae glycine riboswitch models, 4.8 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

GCAUAU

Length

6 nucleotides

Bulged bases

6WLT|15|A|U|190

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WLT_075 not in the Motif Atlas

Geometric match to HL_8P9A_188

Geometric discrepancy: 0.3488

The information below is about HL_8P9A_188

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91813.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

24

Unit IDs

6WLT|15|A|G|187
6WLT|15|A|C|188
6WLT|15|A|A|189
6WLT|15|A|U|190
6WLT|15|A|A|191
6WLT|15|A|U|192

Current chains

Chain A

RNA (231-MER)

Nearby chains