HL_6WLU_048

3D structure

PDB id

6WLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

V. cholerae glycine riboswitch with glycine models, 5.7 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

AUAUAUU

Length

7 nucleotides

Bulged bases

6WLU|10|A|U|104

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WLU_048 not in the Motif Atlas

Geometric match to HL_9E6Q_033

Geometric discrepancy: 0.2553

The information below is about HL_9E6Q_033

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

6WLU|10|A|A|99
6WLU|10|A|U|100
6WLU|10|A|A|101
6WLU|10|A|U|102
6WLU|10|A|A|103
6WLU|10|A|U|104
6WLU|10|A|U|105

Current chains

Chain A

RNA (231-MER)

Nearby chains