HL_6WLU_074

3D structure

PDB id

6WLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

V. cholerae glycine riboswitch with glycine models, 5.7 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

GUUUAAUC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WLU_074 not in the Motif Atlas

Geometric match to HL_4WF9_039

Geometric discrepancy: 0.2761

The information below is about HL_4WF9_039

Detailed Annotation

GNRA with extra cWW

Broad Annotation

GNRA with extra cWW

Motif group

HL_87268.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6WLU|15|A|G|155
6WLU|15|A|U|156
6WLU|15|A|U|157
6WLU|15|A|U|158
6WLU|15|A|A|159
6WLU|15|A|A|160
6WLU|15|A|U|161
6WLU|15|A|C|162

Current chains

Chain A

RNA (231-MER)

Nearby chains