HL_6WLU_084

3D structure

PDB id

6WLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

V. cholerae glycine riboswitch with glycine models, 5.7 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

GUUUAAUC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WLU_084 not in the Motif Atlas

Geometric match to HL_3HHN_010

Geometric discrepancy: 0.3292

The information below is about HL_3HHN_010

Detailed Annotation

GNRA with tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.5

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6WLU|17|A|G|155
6WLU|17|A|U|156
6WLU|17|A|U|157
6WLU|17|A|U|158
6WLU|17|A|A|159
6WLU|17|A|A|160
6WLU|17|A|U|161
6WLU|17|A|C|162

Current chains

Chain A

RNA (231-MER)

Nearby chains