HL_6WNV_009

3D structure

PDB id

6WNV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome without free 5S rRNA and with a perturbed PTC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

6WNV|1|3|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WNV_009 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.1399

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

6WNV|1|3|C|342
6WNV|1|3|U|343
6WNV|1|3|A|344
6WNV|1|3|C|345
6WNV|1|3|G|346
6WNV|1|3|G|347

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain k

50S ribosomal protein L14

Chain p

50S ribosomal protein L19