HL_6WNV_012

3D structure

PDB id

6WNV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome without free 5S rRNA and with a perturbed PTC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WNV_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.3005

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6WNV|1|3|G|462
6WNV|1|3|U|463
6WNV|1|3|U|464
6WNV|1|3|A|465
6WNV|1|3|A|466
6WNV|1|3|U|467
6WNV|1|3|A|468
6WNV|1|3|C|469
6WNV|1|3|C|470

Current chains

Chain 3

16S ribosomal RNA

Nearby chains