HL_6WNV_052
3D structure
- PDB id
- 6WNV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome without free 5S rRNA and with a perturbed PTC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UGUCGAAAAA
- Length
- 10 nucleotides
- Bulged bases
- 6WNV|1|4|C|747, 6WNV|1|4|A|751, 6WNV|1|4|A|752
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WNV_052 not in the Motif Atlas
- Geometric match to HL_7A0S_022
- Geometric discrepancy: 0.1014
- The information below is about HL_7A0S_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
6WNV|1|4|U|744
6WNV|1|4|G|745
6WNV|1|4|U|746
6WNV|1|4|C|747
6WNV|1|4|G|748
6WNV|1|4|A|749
6WNV|1|4|A|750
6WNV|1|4|A|751
6WNV|1|4|A|752
6WNV|1|4|A|753
Current chains
- Chain 4
- 23s-5s joint ribosomal RNA
Nearby chains
- Chain B
- 50S ribosomal protein L32
- Chain D
- 50S ribosomal protein L34
- Chain c
- 50S ribosomal protein L3
- Chain d
- 50S ribosomal protein L4
- Chain s
- 50S ribosomal protein L22
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