HL_6WNV_104

3D structure

PDB id

6WNV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome without free 5S rRNA and with a perturbed PTC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGUGGACGCCAGUCUGCA

Length

18 nucleotides

Bulged bases

6WNV|1|4|C|2273, 6WNV|1|4|C|2274, 6WNV|1|4|A|2275, 6WNV|1|4|U|2279

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WNV|1|4|U|2265
6WNV|1|4|G|2266
6WNV|1|4|U|2267
6WNV|1|4|G|2268
6WNV|1|4|G|2269
6WNV|1|4|A|2270
6WNV|1|4|C|2271
6WNV|1|4|G|2272
6WNV|1|4|C|2273
6WNV|1|4|C|2274
6WNV|1|4|A|2275
6WNV|1|4|G|2276
6WNV|1|4|U|2277
6WNV|1|4|C|2278
6WNV|1|4|U|2279
6WNV|1|4|G|2280
6WNV|1|4|C|2281
6WNV|1|4|A|2282

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains

Chain a

50S ribosomal protein L1