HL_6WNW_033
3D structure
- PDB id
- 6WNW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGCUAAUCUG
- Length
- 10 nucleotides
- Bulged bases
- 6WNW|1|4|G|60, 6WNW|1|4|C|61
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WNW_033 not in the Motif Atlas
- Geometric match to HL_4GXY_003
- Geometric discrepancy: 0.226
- The information below is about HL_4GXY_003
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_65794.5
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
6WNW|1|4|U|59
6WNW|1|4|G|60
6WNW|1|4|C|61
6WNW|1|4|U|62
6WNW|1|4|A|63
6WNW|1|4|A|64
6WNW|1|4|U|65
6WNW|1|4|C|66
6WNW|1|4|U|67
6WNW|1|4|G|68
Current chains
- Chain 4
- 23s-5s joint ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L34
- Chain t
- 50S ribosomal protein L23
- Chain y
- 50S ribosomal protein L29
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