HL_6WNW_035

3D structure

PDB id

6WNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

6WNW|1|4|A|125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WNW_035 not in the Motif Atlas

Geometric match to HL_7RQB_003

Geometric discrepancy: 0.093

The information below is about HL_7RQB_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70546.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

6WNW|1|4|G|123
6WNW|1|4|G|124
6WNW|1|4|A|125
6WNW|1|4|A|126
6WNW|1|4|A|127
6WNW|1|4|C|128

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L34

Chain t

50S ribosomal protein L23