HL_6WNW_060

3D structure

PDB id

6WNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAUGCCG

Length

7 nucleotides

Bulged bases

6WNW|1|4|G|1107

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WNW_060 not in the Motif Atlas

Homologous match to HL_5J7L_203

Geometric discrepancy: 0.1928

The information below is about HL_5J7L_203

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47787.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

10

Unit IDs

6WNW|1|4|C|1104
6WNW|1|4|A|1105
6WNW|1|4|U|1106
6WNW|1|4|G|1107
6WNW|1|4|C|1108
6WNW|1|4|C|1109
6WNW|1|4|G|1110

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains

Chain A

50S ribosomal protein L31

Chain e

50S ribosomal protein L5

Chain o

50S ribosomal protein L18