HL_6WNW_068

3D structure

PDB id

6WNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

6WNW|1|4|U|1524, 6WNW|1|4|U|1525

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WNW_068 not in the Motif Atlas

Geometric match to HL_4V9F_037

Geometric discrepancy: 0.1395

The information below is about HL_4V9F_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77449.1

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

14

Unit IDs

6WNW|1|4|G|1517
6WNW|1|4|U|1518
6WNW|1|4|U|1519
6WNW|1|4|A|1520
6WNW|1|4|A|1521
6WNW|1|4|U|1522
6WNW|1|4|A|1523
6WNW|1|4|U|1524
6WNW|1|4|U|1525
6WNW|1|4|C|1526

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains

Chain t

50S ribosomal protein L23