HL_6WNW_071

3D structure

PDB id

6WNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

6WNW|1|4|A|1663

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WNW_071 not in the Motif Atlas

Geometric match to HL_3V7E_002

Geometric discrepancy: 0.3586

The information below is about HL_3V7E_002

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

6WNW|1|4|C|1661
6WNW|1|4|U|1662
6WNW|1|4|A|1663
6WNW|1|4|C|1664
6WNW|1|4|G|1665
6WNW|1|4|G|1666

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains