HL_6WNW_076

3D structure

PDB id

6WNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

6WNW|1|4|U|1857, 6WNW|1|4|C|1860

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WNW_076 not in the Motif Atlas

Geometric match to HL_361D_002

Geometric discrepancy: 0.3209

The information below is about HL_361D_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

6WNW|1|4|C|1855
6WNW|1|4|C|1856
6WNW|1|4|U|1857
6WNW|1|4|C|1858
6WNW|1|4|G|1859
6WNW|1|4|C|1860
6WNW|1|4|G|1861

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains