HL_6WNW_093
3D structure
- PDB id
- 6WNW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AGUUCAUAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6WNW_093 not in the Motif Atlas
- Geometric match to HL_4WF9_056
- Geometric discrepancy: 0.1218
- The information below is about HL_4WF9_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52011.1
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
6WNW|1|4|A|2599
6WNW|1|4|G|2600
6WNW|1|4|U|2601
6WNW|1|4|U|2602
6WNW|1|4|C|2603
6WNW|1|4|A|2604
6WNW|1|4|U|2605
6WNW|1|4|A|2606
6WNW|1|4|U|2607
Current chains
- Chain 4
- 23s-5s joint ribosomal RNA
Nearby chains
- Chain 7
- Transfer RNA; tRNA
- Chain F
- 50S ribosomal protein L36
- Chain f
- 50S ribosomal protein L6
- Chain m
- 50S ribosomal protein L16
Coloring options: