HL_6WNW_095

3D structure

PDB id

6WNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WNW_095 not in the Motif Atlas

Geometric match to HL_5TBW_063

Geometric discrepancy: 0.2069

The information below is about HL_5TBW_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_36430.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6WNW|1|4|C|2679
6WNW|1|4|U|2680
6WNW|1|4|G|2681
6WNW|1|4|U|2682
6WNW|1|4|U|2683
6WNW|1|4|C|2684
6WNW|1|4|G|2685

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains

Chain 7

Transfer RNA; tRNA