HL_6WQN_009

3D structure

PDB id

6WQN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAACGUUG

Length

8 nucleotides

Bulged bases

6WQN|1|1|C|280, 6WQN|1|1|G|291, 6WQN|1|1|U|292

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WQN_009 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.2436

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

6WQN|1|1|C|277
6WQN|1|1|A|278
6WQN|1|1|A|279
6WQN|1|1|C|280
6WQN|1|1|G|291
6WQN|1|1|U|292
6WQN|1|1|U|293
6WQN|1|1|G|294

Current chains

Chain 1

23S rRNA

Nearby chains