HL_6WQN_037

3D structure

PDB id

6WQN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCUGCGGUAGC

Length

11 nucleotides

Bulged bases

6WQN|1|1|C|1542, 6WQN|1|1|G|1556

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6WQN_037 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.1055

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

6WQN|1|1|G|1523
6WQN|1|1|C|1524
6WQN|1|1|U|1525
6WQN|1|1|G|1526
6WQN|1|1|C|1542
6WQN|1|1|G|1543
6WQN|1|1|G|1544
6WQN|1|1|U|1545
6WQN|1|1|A|1546
6WQN|1|1|G|1556
6WQN|1|1|C|1557

Current chains

Chain 1

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L2